Databases
Structural and force-field databases used in nucleic-acid computational studies.
From structures to parameters.
Key databases used to locate experimental structures, RNA annotations, biological sequence information, and modeling parameters.
Structural Databases
Experimental macromolecular structures and curated nucleic-acid coordinates.
RCSB Protein Data Bank
Search and download experimentally determined biomolecular structures.
Visit resource ↗Nucleic Acid Database
Structural information focused on nucleic acids and their complexes.
Visit resource ↗PDBe
European Protein Data Bank portal for macromolecular structures and annotations.
Visit resource ↗RNA & Sequence Resources
Sequence, secondary structure, and RNA-focused resources used in modeling workflows.
Force Fields & Specialized Resources
Parameter and interaction resources that support molecular mechanics studies.
AMBER Models & Parameters
AMBER force fields, models, and supporting parameter resources.
Visit resource ↗Nucleic Acid Interaction Library
A specialized resource for nucleic-acid interaction analysis.
RNA CoSSMos
A specialized RNA motif and structural resource retained from the lab’s original collection.